Parse ThermoFisher MSF Files and Estimate Protein Abundances

Provides functions for parsing ThermoFisher MSF files produced by Proteome Discoverer 1.4.x (see <> for more information). This package makes it easy to view individual peptide information, including peak areas, and to map peptides to locations within the parent protein sequence. This package also estimates protein abundances from peak areas and across multiple technical replicates. The author of this package is not affiliated with ThermoFisher Scientific in any way.


Reference manual

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0.1.1 by Benjamin Jack, a month ago

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Authors: Benjamin Jack [aut, cre]

Documentation:   PDF Manual  

GPL-2 license

Imports dplyr, dbplyr, DBI, lazyeval, RSQLite, stats, stringr, tidyr

Suggests testthat, knitr, rmarkdown, ggplot2

See at CRAN