Examples: visualization, C++, networks, data cleaning, html widgets, ropensci.

Found 143 packages in 0.01 seconds

shiny.pwa — by Pedro Silva, 3 years ago

Progressive Web App Support for Shiny

Adds Progressive Web App support for Shiny apps, including desktop and mobile installations.

ROCaggregator — by Pedro Mateus, 3 years ago

Aggregate Multiple ROC Curves into One Global ROC

Aggregates multiple Receiver Operating Characteristic (ROC) curves obtained from different sources into one global ROC. Additionally, it’s also possible to calculate the aggregated precision-recall (PR) curve.

robsel — by Chau Tran, 3 years ago

Robust Selection Algorithm

An implementation of algorithms for estimation of the graphical lasso regularization parameter described in Pedro Cisneros-Velarde, Alexander Petersen and Sang-Yun Oh (2020) < http://proceedings.mlr.press/v108/cisneros20a.html>.

imola — by Pedro Silva, 2 years ago

CSS Layouts (Grid and Flexbox) Implementation for R/Shiny

Allows easy creation of CSS layouts (grid and flexbox) directly from R without added CSS.

RColorConesa — by Pedro Salguero Garcia, 7 months ago

Conesa Colors Palette

Provides a collection of palettes designed to integrate with 'ggplot', reflecting the color schemes associated with 'ConesaLab'.

SoundShape — by Pedro Rocha, 7 months ago

Sound Waves Onto Morphometric Data

Implement a promising, and yet little explored protocol for bioacoustical analysis, the eigensound method by MacLeod, Krieger and Jones (2013) . Eigensound is a multidisciplinary method focused on the direct comparison between stereotyped sounds from different species. 'SoundShape', in turn, provide the tools required for anyone to go from sound waves to Principal Components Analysis, using tools extracted from traditional bioacoustics (i.e. 'tuneR' and 'seewave' packages), geometric morphometrics (i.e. 'geomorph' package) and multivariate analysis (e.g. 'stats' package). For more information, please see Rocha and Romano (2021) and check 'SoundShape' repository on GitHub for news and updates < https://github.com/p-rocha/SoundShape>.

spidR — by Pedro Cardoso, 2 years ago

Spider Knowledge Online

Allows the user to connect with the World Spider Catalogue (WSC; < https://wsc.nmbe.ch/>) and the World Spider Trait (WST; < https://spidertraits.sci.muni.cz/>) databases. Also performs several basic functions such as checking names validity, retrieving coordinate data from the Global Biodiversity Information Facility (GBIF; < https://www.gbif.org/>), and mapping.

phylin — by Pedro Tarroso, 4 years ago

Spatial Interpolation of Genetic Data

The spatial interpolation of genetic distances between samples is based on a modified kriging method that accepts a genetic distance matrix and generates a map of probability of lineage presence. This package also offers tools to generate a map of potential contact zones between groups with user-defined thresholds in the tree to account for old and recent divergence. Additionally, it has functions for IDW interpolation using genetic data and midpoints.

RAT — by Pedro Cardoso, 2 years ago

Research Assessment Tools

Includes algorithms to assess research productivity and patterns, such as the h-index and i-index. Cardoso et al. (2022) Cardoso, P., Fukushima, C.S. & Mammola, S. (2022) Quantifying the internationalization and representativeness in research. Trends in Ecology and Evolution, 37: 725-728.

Rlda — by Pedro Albuquerque, 5 years ago

Bayesian LDA for Mixed-Membership Clustering Analysis

Estimates the Bayesian LDA model for mixed-membership clustering based on different types of data (i.e., Multinomial, Bernoulli, and Binomial entries). Albuquerque, Valle and Li (2019) .