Distributed Gaussian Process Calculations

Distributes Gaussian process calculations across nodes in a distributed memory setting, using Rmpi. The bigGP class provides high-level methods for maximum likelihood with normal data, prediction, calculation of uncertainty (i.e., posterior covariance calculations), and simulation of realizations. In addition, bigGP provides an API for basic matrix calculations with distributed covariance matrices, including Cholesky decomposition, back/forwardsolve, crossproduct, and matrix multiplication.


bigGP

R package for parallel computation for Gaussian processes

Reference manual

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install.packages("bigGP")

0.1.9 by Christopher Paciorek, 2 years ago


https://doi.org/10.18637/jss.v063.i10


Report a bug at https://github.com/paciorek/bigGP/issues


Browse source code at https://github.com/cran/bigGP


Authors: Christopher Paciorek [aut, cre] , Benjamin Lipshitz [aut] , Prabhat [ctb] , Cari Kaufman [ctb] , Tina Zhuo [ctb] , Rollin Thomas [ctb]


Documentation:   PDF Manual  


GPL (>= 2) license


Depends on Rmpi, methods

Suggests rlecuyer, fields

System requirements: OpenMPI or MPICH2


See at CRAN