Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm

An algorithm for identifying combinations of mutually exclusive alterations in cancer genomes. CoMEt represents the mutations in a set M of k genes with a 2^k dimensional contingency table, and then computes the tail probability of observing T(M) exclusive alterations using an exact statistical test.


News

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("cometExactTest")

0.1.3 by Max Leiserson, 2 years ago


http://compbio.cs.brown.edu/projects/comet, http://www.r-project.org


Browse source code at https://github.com/cran/cometExactTest


Authors: Max Leiserson [aut, cre], Hsin-Ta Wu [aut], Fabio Vandin [ctb], Vivian Hsiao [ctb], Benjamin Raphael [ctb]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports dplyr


See at CRAN