Reference manual

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install.packages("hicream")

0.0.1 by Elise Jorge, 2 days ago


https://forgemia.inra.fr/scales/hicream


Report a bug at https://forgemia.inra.fr/scales/hicream/-/issues


Browse source code at https://github.com/cran/hicream


Authors: Elise Jorge [aut, cre] , Sylvain Foissac [aut] , Pierre Neuvial [aut] , Nathalie Vialaneix [aut] (ORCID: , Gilles Blanchard [ctb] , Guillermo Durand [ctb] , Nicolas Enjalbert-Courrech [ctb] , Etienne Roquain [ctb]


Documentation:   PDF Manual  


GPL (>= 3) license


Imports adjclust, auk, BiocGenerics, csaw, diffHic, dplyr, edgeR, GenomeInfoDb, GenomicRanges, InteractionSet, limma, Matrix, methods, reshape2, rlang, S4Vectors, stats, SummarizedExperiment, utils, viridis

Depends on reticulate

Suggests knitr, rmarkdown

System requirements: Python (>= 3.9)


See at CRAN