Sparse High-Dimensional Linear Regression with PROBE

Implements an efficient and powerful Bayesian approach for sparse high-dimensional linear regression. It uses minimal prior assumptions on the parameters through plug-in empirical Bayes estimates of hyperparameters. An efficient Parameter-Expanded Expectation-Conditional-Maximization (PX-ECM) algorithm estimates maximum a posteriori (MAP) values of regression parameters and variable selection probabilities. The PX-ECM results in a robust computationally efficient coordinate-wise optimization, which adjusts for the impact of other predictor variables. The E-step is motivated by the popular two-group approach to multiple testing. The result is a PaRtitiOned empirical Bayes Ecm (PROBE) algorithm applied to sparse high-dimensional linear regression, implemented using one-at-a-time or all-at-once type optimization. More information can be found in McLain, Zgodic, and Bondell (2022) .


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("probe")

1.1 by Alexander McLain, 3 years ago


Report a bug at https://github.com/alexmclain/PROBE/issues


Browse source code at https://github.com/cran/probe


Authors: Alexander McLain [aut, cre] , Anja Zodiac [aut, ctb]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports Rcpp, glmnet

Linking to Rcpp, RcppArmadillo


See at CRAN