Linkage Map Construction using the MSTmap Algorithm

Functions for Accurate and Speedy linkage map construction, manipulation and diagnosis of Doubled Haploid, Backcross and Recombinant Inbred 'R/qtl' objects. This includes extremely fast linkage map clustering and optimal marker ordering using 'MSTmap' (see Wu et al.,2008).


Reference manual

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1.0-2 by Julian Taylor, 9 days ago

Browse source code at

Authors: Julian Taylor <>, David Butler <>.

Documentation:   PDF Manual  

GPL (>= 2) license

Depends on qtl, gtools, fields, RColorBrewer, lattice

Suggests knitr

See at CRAN