Disk-Based Implementation of PeakSegFPOP

Disk-based implementation of Functional Pruning Optimal Partitioning with up-down constraints for single-sample peak calling (independently for each sample and genomic problem), can handle huge data sets (10^7 or more).


Reference manual

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2018.11.28 by Toby Dylan Hocking, 3 months ago

Browse source code at https://github.com/cran/PeakSegDisk

Authors: Toby Dylan Hocking

Documentation:   PDF Manual  

GPL-3 license

Imports data.table, parallel

Suggests testthat, ggplot2, penaltyLearning

See at CRAN