Process Rhea, KEGG, MetaCyc, Unipathway Biochemical Reaction Data

To facilitate retrieving and processing biochemical reaction data such as Rhea, MetaCyc, KEGG and Unipathway, the package provides the functions to download and parse data, instantiate generic reaction and check mass-balance. The package aims to construct an integrated metabolic network and genome-scale metabolic model.


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.


1.5.1 by Byoungnam Min, 3 years ago

Browse source code at

Authors: Byoungnam Min, Byeonghyeok Park, Kyoung Heon Kim and In-Geol Choi

Documentation:   PDF Manual  

GPL (>= 2) license

Imports plyr, RCurl, gdata, KEGGREST, data.table, stringr

Depends on fmcsR, ChemmineR

See at CRAN