Process Rhea, KEGG, MetaCyc, Unipathway Biochemical Reaction Data

To facilitate retrieving and processing biochemical reaction data such as Rhea, MetaCyc, KEGG and Unipathway, the package provides the functions to download and parse data, instantiate generic reaction and check mass-balance. The package aims to construct an integrated metabolic network and genome-scale metabolic model.


News

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("RbioRXN")

1.5.1 by Byoungnam Min, 2 years ago


Browse source code at https://github.com/cran/RbioRXN


Authors: Byoungnam Min, Byeonghyeok Park, Kyoung Heon Kim and In-Geol Choi


Documentation:   PDF Manual  


GPL (>= 2) license


Imports plyr, RCurl, gdata, KEGGREST, data.table, stringr

Depends on fmcsR, ChemmineR


See at CRAN