A Comprehensive Tool for Protein Design

Provides tools for designing virus protein panels through sequence clustering and protein sequence analysis. The package includes functionality for filtering sequences, removing redundancy, identifying outliers, clustering sequences, and calculating entropy to evaluate clustering quality. A publication describing these methods is in preparation and will be added once available.


Reference manual

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install.packages("VIProDesign")

0.1.0 by Tatsiana Bylund, a year ago


Browse source code at https://github.com/cran/VIProDesign


Authors: Tatsiana Bylund [aut, cre]


Documentation:   PDF Manual  


Apache License 2.0 license


Imports Biostrings, DECIPHER, cluster, pathviewr, dbscan, ape

Suggests optparse


See at CRAN