Agent-Based Model for Taenia_solium Transmission and Control

The cystiSim package provides an agent-based model for Taenia solium transmission and control. cystiSim was developed within the framework of CYSTINET, the European Network on taeniosis/cysticercosis, COST ACTION TD1302.


Agent-based model for Taenia solium transmission and control

devtools::install_github("brechtdv/cystiSim")
library("cystiSim")

Start exploring cystiSim through the documentation and examples on the Wiki page.

cystiSim was developed by @UCBraae and @brechtdv, within the framework of CYSTINET, the European Network on taeniosis/cysticercosis, COST ACTION TD1302.

News

cystiSim 0.1.0

  • first commit to CRAN

cystiSim 0.0.6

  • rename intervention functions

  • update help files

  • add argument annotate to plot.cystiSim

cystiSim 0.0.5

  • add elim method for cystiSim objects

  • fix bug in exp_decay

cystiSim 0.0.4

  • fix bug in definition of slaughter.args

  • fix subsetting bug in do_oxf_vac

cystiSim 0.0.3

  • various CRAN error/warning/note fixes

  • change default min.age in do_oxf to 1

  • introduce do_oxf_vac function

cystiSim 0.0.2

  • introduce magrittr style model definitions

  • introduce functionalities and methods for multiple cystiSim simulations

  • introduce functionalities for fitting models to data

  • update model to make slaughter function generic

cystiSim 0.0.1

  • the first version

Reference manual

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install.packages("cystiSim")

0.1.0 by Brecht Devleesschauwer, 2 years ago


https://github.com/brechtdv/cystiSim


Report a bug at https://github.com/brechtdv/cystiSim/issues


Browse source code at https://github.com/cran/cystiSim


Authors: Brecht Devleesschauwer [aut, cre], Uffe Christian Braae [aut]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports magrittr, knitr, graphics, grDevices, stats, utils

Depends on ggplot2


See at CRAN