Analysing and plotting genotype-phenotype maps

This package contains tools for studying genotype-phenotype (GP) maps for bi-allelic loci underlying quantitative phenotypes. The 0.1 version is released in connection with the publication of Gjuvsland et al. (2003) and implements basic line plots and the monotonicity measures for GP maps presented in the paper. Reference: Gjuvsland AB, Wang Y, Plahte E and Omholt SW (2013) Monotonicity is a key feature of genotype-phenotype maps. Front. Genet. 4:216. doi: 10.3389/fgene.2013.00216 [\href{ http://www.frontiersin.org/Journal/10.3389/fgene.2013.00216/full}{link}]


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install.packages("gpmap")

0.1.1 by Arne B. Gjuvsland, 4 years ago


Browse source code at https://github.com/cran/gpmap


Authors: Arne B. Gjuvsland <arne.gjuvsland@nmbu.no> and Yunpeng Wang <yunpeng.wng@gmail.com>


Documentation:   PDF Manual  


GPL-3 license


Depends on isotone, plyr, ggplot2, foreach


See at CRAN