Bayesian Mixture Analysis for Metagenomic Community Profiling

Resolves complex metagenomic mixtures by analysing deep sequencing data, using a mixture model based approach. The use of parallel Monte Carlo Markov chains for the exploration of the species space enables the identification of the set of species more likely to contribute to the mixture.


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install.packages("metaMix")

0.2 by Sofia Morfopoulou, 3 years ago


Browse source code at https://github.com/cran/metaMix


Authors: Sofia Morfopoulou <sofia.morfopoulou.10@ucl.ac.uk>


Documentation:   PDF Manual  


GPL-3 license


Imports data.table, Matrix, gtools, Rmpi, ggplot2

Suggests knitr

System requirements: Open MPI (>=1.4.3)


See at CRAN