Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models

Extended tools for analyzing telemetry data using (multivariate) hidden Markov models. These include processing of tracking data, fitting HMMs to location and auxiliary biotelemetry or environmental data, multiple imputation for incorporating location measurement error and missing data, visualization of data and fitted model, decoding of the state process...


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install.packages("momentuHMM")

1.1.1 by Brett McClintock, 5 days ago


Browse source code at https://github.com/cran/momentuHMM


Authors: Brett McClintock, Theo Michelot


Documentation:   PDF Manual  


GPL-3 license


Imports Rcpp, doParallel, foreach, numDeriv, CircStats, crawl, ggmap, ggplot2, mitools, moveHMM, raster, argosfilter, car, mvtnorm, boot, sp, MASS, Brobdingnag, gstat, conicfit, nleqslv, survival, qdapRegex, geosphere, LaplacesDemon

Depends on splines, splines2

Suggests testthat, setRNG, knitr

Linking to Rcpp, RcppArmadillo


See at CRAN