Fit Neutral Community Model to Microbiome or Ecological Data

Provides tools for fitting the neutral community model (NCM) to assess the role of stochastic processes in community assembly. The package implements the framework of Sloan et al. (2006) , enabling users to evaluate neutral dynamics in ecological and microbial communities.

ncmR

Overview

Provides tools for fitting the neutral community model (NCM) to assess the role of stochastic processes in community assembly. The package implements the framework of Sloan et al. (2006) doi:10.1111/j.1462-2920.2005.00956.x, enabling users to evaluate neutral dynamics in ecological and microbial communities.

Installation

# Install stable version from CRAN
install.packages("ncmR")

# Install development version from GitHub
# install.packages("pak")
# pak::pak("h-xuanjiu/ncmR")

# install.packages("remotes")
remotes::install_github("h-xuanjiu/ncmR")

Shiny App

# Load package
library(ncmR)

# Start Shiny app in browser
run_app()