Circle Packing

Simple algorithms for circle packing.


R package for circle packing.

Travis Build Status

This package provides functions to find non-overlapping arrangements of circles.

The function circleRepelLayout attempts to arrange a set of circles of specified radii within a rectangle such that there is no-overlap between circles. The algorithm is adapted from an example written in Processing by Sean McCullough (which no longer seems to be available online). It involves iterative pair-repulsion, in which overlapping circles move away from each other. The distance moved by each circle is proportional to the radius of the other to approximate inertia (very loosely), so that when a small circle is overlapped by a large circle, the small circle moves furthest. This process is repeated iteratively until no more movement takes place (acceptable layout) or a maximum number of iterations is reached (layout failure). To avoid edge effects, the bounding rectangle is treated as a toroid. Each circle's centre is constrained to lie within the rectangle but its edges are allowed to extend outside.

The function circleProgressiveLayout arranges a set of circles, which are denoted by their sizes, by consecutively placing each circle externally tangent to two previously placed circles while avoiding overlaps. It was adapted from a version written in C by Peter Menzel. The underlying algorithm is described in the paper: Visualization of large hierarchical data by circle packing by Weixin Wang, Hui Wang, Guozhong Dai, and Hongan Wang. Published in Proceedings of the SIGCHI Conference on Human Factors in Computing Systems, 2006, pp. 517-520. ACM.

The function circleRemoveOverlaps takes an initial set of overlapping circles and attempts to find a non-overlapping subset or, optionally, a subset with some specified degree of overlap. Circle positions remain fixed. It provides several fast heuristic algorithms to choose from, as well as two based on linear programming. For the latter, package lpSolve must be installed.

The function circleGraphLayout is an initial Rcpp port of an algorithm described by Collins and Stephenson (2003) to find an arrangement of circles which corresponds to a graph of desired circle tangencies. The implementation is based on a Python version by David Eppstein (see CirclePack.py in the PADS library.

To install:

  • the latest released version: install.packages("packcircles")
  • the latest development version: install_github("mbedward/packcircles")

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News

NEWS packcircles

Version 0.3.1 2018-01-09

  • Fixed a problem where function circleProgressiveLayout sometimes returned a layout with overlapping circles. Thanks to Jeffrey Lewis for reporting and Peter Menzel for code changes.

Version 0.3.0 2017-11-24

  • Added circleRemoveOverlaps which takes a set of circles and identifies a subset of non-overlapping circles. The function can also be set to allow some degree of overlap or require space between circles. The function uses either a fast heuristic algorithm (several choices) or linear programming (requires package lpSolve).

  • Replaced use of sprintf with snprintf in pads_circle_pack.cpp (graph-based circle packing) to address CRAN warning.

Version 0.2.0 2017-04-05

  • Added circleProgressiveLayout which deterministically places each circle in turn such that it is externally tangent to two previously placed circles while avoiding overlaps.

  • Replaced circleLayout with a new function circleRepelLayout. The original function is retained for backwards compatibility but is deprecated and will be removed in a future release. Important note: the new function accepts circles sizes as either areas or radii. The default is area, unlike circleLayout which assumed sizes were radii. The type of size value can be specified using the sizetype argument.

  • Replaced circlePlotData with a new function circleLayoutVertices. The original function is retained for backwards compatibility but is deprecated and will be removed in a future release. The new function has a sizetype argument to specify whether the input circle sizes are areas or radii. By default, radius is assumed as this matches the output of the layout functions but I realize it's a bit confusing.

  • Removed gridExtra from suggested packages. Added ggiraph (used for vignette).

  • Re-wrote the introductory vignette and added a new vignette for circleProgressiveLayout.

  • Edited function docs and examples.

  • Added file for native routine registration as now required by CRAN.

Reference manual

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install.packages("packcircles")

0.3.1 by Michael Bedward, a month ago


https://github.com/mbedward/packcircles


Report a bug at https://github.com/mbedward/packcircles/issues


Browse source code at https://github.com/cran/packcircles


Authors: Michael Bedward [aut, cre], David Eppstein [aut] (Author of Python code for graph-based circle packing ported to C++ for this package), Peter Menzel [aut] (Author of C code for progressive circle packing ported to C++ for this package)


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports Rcpp

Suggests ggiraph, ggplot2, knitr, rmarkdown, lpSolve

Linking to Rcpp


See at CRAN