Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics

Helps with quality checks, visualizations and analysis of mass spectrometry data, coming from proteomics experiments. The package is developed, tested and used at the Functional Genomics Center Zurich. We use this package mainly for prototyping, teaching, and having fun with proteomics data. But it can also be used to do data analysis for small scale data sets.


protViz CRAN package

News

BUG FIXES

o free memory computeFragmentIons.c

INSTALL

o added more tests for deisotoper.R and fragmentIon.R

Reference manual

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install.packages("protViz")

0.2.37 by Christian Panse, 11 days ago


https://github.com/protViz/protViz/


Report a bug at https://github.com/protViz/protViz/issues


Browse source code at https://github.com/cran/protViz


Authors: Christian Panse [aut, cre] (0000-0003-1975-3064), Jonas Grossmann [aut], Simon Barkow-Oesterreicher [ctb]


Documentation:   PDF Manual  


GPL-3 license


Imports Rcpp

Depends on methods

Suggests lattice, RUnit, xtable


See at CRAN