Reference manual

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install.packages("tidypopgen")

0.3.2 by Andrea Manica, 13 hours ago


https://github.com/EvolEcolGroup/tidypopgen, https://evolecolgroup.github.io/tidypopgen/


Report a bug at https://github.com/EvolEcolGroup/tidypopgen/issues


Browse source code at https://github.com/cran/tidypopgen


Authors: Evie Carter [aut] , Eirlys Tysall [aut] , Andrea Manica [aut, cre, cph] (ORCID: , Chang Christopher [ctb] (Author of Hardy-Weinberg Equilibrium algorithm in PLINK 1.90 , used in loci_hwe()) , Shaun Purcell [ctb] (Author of Hardy-Weinberg Equilibrium algorithm in PLINK 1.90 , used in loci_hwe()) , Bengtsson Henrik [ctb] (Author of countLines in R.utils , modified for .vcf in count_vcf_variants())


Documentation:   PDF Manual  


GPL (>= 3) license


Imports bigparallelr, bigsnpr, bigstatsr, foreach, generics, ggplot2, methods, MASS, patchwork, runner, rlang, sf, stats, tidyselect, tidyr, utils, Rcpp, UpSetR, vctrs

Depends on dplyr, tibble

Suggests adegenet, admixtools, broom, data.table, hierfstat, knitr, detectRUNS, LEA, RhpcBLASctl, rmarkdown, rnaturalearth, rnaturalearthdata, readr, reticulate, testthat, vcfR, xgboost, spelling

Linking to Rcpp, RcppArmadillo, bigstatsr, rmio


See at CRAN