All packages

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pheatmap — 1.0.12

Pretty Heatmaps

PheCAP — 1.2.1

High-Throughput Phenotyping with EHR using a Common Automated Pipeline

phecodemap — 0.1.0

Visualization for PheCode Mapping with ICD-9 and ICD-10-CM Codes

PHEindicatormethods — 2.1.0

Common Public Health Statistics and their Confidence Intervals

phenesse — 0.1.2

Estimate Phenological Metrics using Presence-Only Data

phenex — 1.4-5

Auxiliary Functions for Phenological Data Analysis

PHENIX — 1.3.1

Phenotypic Integration Index

phenmod — 1.2-7

Auxiliary Functions for Phenological Data Processing, Modelling and Result Handling

phenModel — 1.0

Insect Phenology Model Evaluation Based on Daily Temperatures

pheno — 1.7-0

Auxiliary Functions for Phenological Data Analysis

phenocamr — 1.1.5

Facilitates 'PhenoCam' Data Access and Time Series Post-Processing

phenoCDM — 0.1.3

Continuous Development Models for Incremental Time-Series Analysis

phenofit — 0.3.9

Extract Remote Sensing Vegetation Phenology

phenolocrop — 0.0.2

Time-Series Models to the Crop Phenology

phenology — 10.1

Tools to Manage a Parametric Function that Describes Phenology and More

phenomap — 2.0.1

Projecting Satellite-Derived Phenology in Space

phenopix — 2.4.5

Process Digital Images of a Vegetation Cover

PheNorm — 0.1.0

Unsupervised Gold-Standard Label Free Phenotyping Algorithm for EHR Data

PhenoSpectra — 0.1.0

Multispectral Data Analysis and Visualization

Phenotype — 0.1.0

A Tool for Phenotypic Data Processing

PhenotypeR — 0.1.4

Assess Study Cohorts Using a Common Data Model

PhenotypeSimulator — 0.3.4

Flexible Phenotype Simulation from Different Genetic and Noise Models

PHENTHAUproc — 1.1

Phenology Modelling of Thaumetopoea Processionea

phers — 1.0.2

Calculate Phenotype Risk Scores

PHeval — 1.1

Evaluation of the Proportional Hazards Assumption and Test for Comparing Survival Curves with a Standardized Score Process

PheVis — 1.0.4

Automatic Phenotyping of Electronic Health Record at Visit Resolution

Phi2rho — 1.0.1

Owen's T Function and Bivariate Normal Integral

phia — 0.3-1

Post-Hoc Interaction Analysis

phiDelta — 1.0.1

Tool for Phi Delta Analysis of Features

philentropy — 0.9.0

Similarity and Distance Quantification Between Probability Functions

PhilipsHue — 1.0.0

R Interface to the Philips Hue API

PHInfiniteEstimates — 2.9.5

Tools for Inference in the Presence of a Monotone Likelihood

PhitestR — 0.2.0

Analyzing the Heterogeneity of Single-Cell Populations

phm — 1.1.5

Phrase Mining

phoenics — 0.5

Pathways Longitudinal and Differential Analysis in Metabolomics

phoenix — 1.1.2

The Phoenix Pediatric Sepsis and Septic Shock Criteria

phonenumber — 0.2.3

Convert Letters to Numbers and Back as on a Telephone Keypad

phonetisr — 0.1.0

A Naive IPA Tokeniser

phonfieldwork — 0.0.17

Linguistic Phonetic Fieldwork Tools

phonics — 1.3.10

Phonetic Spelling Algorithms

phonR — 1.0-7

Tools for Phoneticians and Phonologists

phonTools — 0.2-2.2

Tools for Phonetic and Acoustic Analyses

phosphoricons — 0.2.1

'Phosphor' Icons for R

photobiology — 0.12.0

Photobiological Calculations

photobiologyFilters — 0.6.0

Spectral Transmittance and Spectral Reflectance Data

photobiologyInOut — 0.4.30

Read Spectral and Logged Data from Foreign Files

photobiologyLamps — 0.5.2

Spectral Irradiance Data for Lamps

photobiologyLEDs — 0.5.2

Spectral Data for Light-Emitting-Diodes

photobiologyPlants — 0.6.0

Plant Photobiology Related Functions and Data

photobiologySensors — 0.5.1

Response Data for Light Sensors

photobiologySun — 0.5.0

Data for Sunlight Spectra

photobiologyWavebands — 0.5.2

Waveband Definitions for UV, VIS, and IR Radiation

PhotoGEA — 1.3.2

Photosynthetic Gas Exchange Analysis

photon — 0.3.5

High-Performance Geocoding using 'photon'

PhotosynQ — 0.2.3

Connect to PhotosynQ

photosynthesis — 2.1.5

Tools for Plant Ecophysiology & Modeling

photosynthesisLRC — 1.0.6

Nonlinear Least Squares Models for Photosynthetic Light Response

phrases — 0.1

Phrasal Verbs in English Club Website

phsmethods — 1.0.2

Standard Methods for Use in Public Health Scotland

PHSMM — 1.0

Penalised Maximum Likelihood Estimation for Hidden Semi-Markov Models

phuassess — 1.1

Proportional Habitat Use Assessment

phutil — 0.0.1

Persistence Homology Utilities

phyclust — 0.1-34

Phylogenetic Clustering (Phyloclustering)

phyext2 — 0.0.4

An Extension (for Package 'SigTree') of Some of the Classes in Package 'phylobase'

phylepic — 0.2.0

Combined Visualisation of Phylogenetic and Epidemiological Data

phylin — 2.0.2

Spatial Interpolation of Genetic Data

phylobase — 0.8.12

Base Package for Phylogenetic Structures and Comparative Data

phylocanvas — 0.1.3

Interactive Phylogenetic Trees Using the 'Phylocanvas' JavaScript Library

phylocomr — 0.3.4

Interface to 'Phylocom'

PhylogeneticEM — 1.8.0

Automatic Shift Detection using a Phylogenetic EM

PHYLOGR — 1.0.11

Functions for Phylogenetically Based Statistical Analyses

phylogram — 2.1.0

Dendrograms for Evolutionary Analysis

phylolm — 2.6.5

Phylogenetic Linear Regression

phylolm.hp — 0.0-3

Hierarchical Partitioning of R2 for Phylogenetic Linear Regression

phylometrics — 0.0.1

Estimating Statistical Errors of Phylogenetic Metrics

phylopairs — 0.1.1

Comparative Analyses of Lineage-Pair Traits

phylopath — 1.3.0

Perform Phylogenetic Path Analysis

phyloraster — 2.2.0

Evolutionary Diversity Metrics for Raster Data

phyloregion — 1.0.8

Biogeographic Regionalization and Macroecology

phylosamp — 1.0.1

Sample Size Calculations for Molecular and Phylogenetic Studies

phylosem — 1.1.4

Phylogenetic Structural Equation Model

phyloseqGraphTest — 0.1.1

Graph-Based Permutation Tests for Microbiome Data

phylosignal — 1.3.1

Exploring the Phylogenetic Signal in Continuous Traits

phylosignalDB — 0.2.2

Explore Phylogenetic Signals Using Distance-Based Methods

phylospatial — 1.1.1

Spatial Phylogenetic Analysis

phylotate — 1.3

Phylogenies with Annotations

phylotools — 0.2.2

Phylogenetic Tools for Eco-Phylogenetics

phyloTop — 2.1.2

Calculating Topological Properties of Phylogenies

phylotypr — 0.1.1

Classifying DNA Sequences to Taxonomic Groupings

phylter — 0.9.11

Detect and Remove Outliers in Phylogenomics Datasets

phyr — 1.1.0

Model Based Phylogenetic Analysis

phyreg — 1.0.2

The Phylogenetic Regression of Grafen (1989)

PhysActBedRest — 1.1

Marks Periods of 'Bedrest' in Actigraph Accelerometer Data

PhysicalActivity — 0.2-4

Process Accelerometer Data for Physical Activity Measurement

PhySortR — 1.0.9

A Fast, Flexible Tool for Sorting Phylogenetic Trees

phytoclass — 2.0.0

Estimate Chla Concentrations of Phytoplankton Groups

phytools — 2.4-4

Phylogenetic Tools for Comparative Biology (and Other Things)

PhytosanitaryCalculator — 1.1.3

Phytosanitary Calculator for Inspection Plans Based on Risks

piar — 0.8.2

Price Index Aggregation

PiC — 1.0.3

Pointcloud Interactive Computation for Forest Structure Analysis

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