Metagenomics Longitudinal Differential Abundant Method

Identify the time intervals when the microbial features are differentially abundant between two phenotypic groups using negative binomial smoothing spline ANOVA (Ahmed Metwally, Patricia Finn, Yang Dai, David Perkins, ACM BCB’17).


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install.packages("MetaLonDA")

1.0.4 by Ahmed Metwally, 2 months ago


https://bitbucket.org/ametwally/metalonda


Browse source code at https://github.com/cran/MetaLonDA


Authors: Ahmed Metwally, Patricia Finn, Yang Dai, David Perkins


Documentation:   PDF Manual  


GPL-2 license


Imports ggplot2, gss, plyr, caTools, parallel, doParallel

Suggests knitr, rmarkdown


See at CRAN