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Simulating Climate Data for Research and Modelling
Generate synthetic station-based monthly climate time-series including
temperature and rainfall, export to Network Common Data Form (NetCDF),
and provide visualization helpers for climate workflows. The approach is
inspired by statistical weather generator concepts described in Wilks (1999)
Non-Homogeneous Markov Switching Autoregressive Models
Calibration, simulation, validation of (non-)homogeneous Markov switching autoregressive models with Gaussian or von Mises innovations. Penalization methods are implemented for Markov Switching Vector Autoregressive Models of order 1 only. Most functions of the package handle missing values.
PaleoPhyloGeographic Modeling of Climate Niches and Species Distributions
Reconstruction of paleoclimate niches using phylogenetic comparative
methods and projection reconstructed niches onto paleoclimate maps.
The user can specify various models of trait evolution or estimate the best fit
model, include fossils, use one or multiple phylogenies for inference, and make
animations of shifting suitable habitat through time. This model was first used
in Lawing and Polly (2011), and further implemented in Lawing et al (2016) and
Rivera et al (2020).
Lawing and Polly (2011)
Simulating Climate Data for Research and Modelling
Advanced climate simulation, forecasting, visualization, export,
and machine learning tools. Generates synthetic climate datasets for single
or multiple weather stations using stochastic weather generation techniques.
'CDSimX' simulates daily climate variables including minimum and maximum
temperature, rainfall, relative humidity, solar radiation, wind speed,
wind direction, dew point temperature, and potential evapotranspiration.
The package incorporates seasonal harmonic models, Markov chain rainfall
occurrence processes, Gamma-distributed rainfall amounts, copula-based
dependence structures, bias-correction procedures, and physical consistency
constraints. 'CDSimX' supports climate data generation, environmental
modeling, machine learning benchmarking, sensitivity analysis, and
educational applications. Methods are based on established stochastic
weather generation approaches described in Richardson (1981)
Plotting Functions for Climate Science and Services
A plotting package for climate science and services. Provides a set
of functions for visualizing climate data, including maps, time series,
scorecards and other diagnostics. Some functions are adapted and extended
from the 's2dv' and 'CSTools' packages (Manubens et al. (2018)
Partitioning Uncertainty Components of an Incomplete Ensemble of Climate Projections
These functions apply an analysis of variance to incomplete ensembles of climate projections.
It provides estimates of climate change responses of all simulation chains and of all uncertainty
variables. It has been applied to different ensembles of projections simulated to study the impact of climate change:
for climate indicators in Evin et al. (2019)
Integrating Phylogenetics and Climatic Niche Modeling
Implements some methods in phyloclimatic modeling: estimation of ancestral climatic niches, age-range-correlation, niche equivalency test and background-similarity test.
Bayesian Emulation of Computer Programs
Allows one to estimate the output of a computer program, as a function of the input parameters, without actually running it. The computer program is assumed to be a Gaussian process, whose parameters are estimated using Bayesian techniques that give a PDF of expected program output. This PDF is conditional on a training set of runs, each consisting of a point in parameter space and the model output at that point. The emphasis is on complex codes that take weeks or months to run, and that have a large number of undetermined input parameters; many climate prediction models fall into this class. The emulator essentially determines Bayesian posterior estimates of the PDF of the output of a model, conditioned on results from previous runs and a user-specified prior linear model. The package includes functionality to evaluate quadratic forms efficiently.
Climate Crop Zoning Based in Air Temperature for Brazil
Climate crop zoning based in minimum and maximum air temperature. The data used in the package are from 'TerraClimate' dataset (< https://www.climatologylab.org/terraclimate.html>), but, it have been calibrated with automatic weather stations of National Meteorological Institute of Brazil. The climate crop zoning of this package can be run for all the Brazilian territory.
Hydrology and Climate Forecasting
Focuses on data processing and visualization in hydrology and climate forecasting. Main function includes data extraction, data downscaling, data resampling, gap filler of precipitation, bias correction of forecasting data, flexible time series plot, and spatial map generation. It is a good pre- processing and post-processing tool for hydrological and hydraulic modellers.