Examples: visualization, C++, networks, data cleaning, html widgets, ropensci.

Found 6911 packages in 0.01 seconds

bitriad — by Jason Cory Brunson, 3 months ago

Triadic Analysis of Affiliation Networks

Two principal tools are provided for the triadic analysis of affiliation networks: triad census and triadic closure. These include several variations on both classical tools tailored to affiliation network structure; see Opsahl (2013) , Liebig and Rao (2014) , and Brunson (2015) . Additional functions support manipulation of affiliation networks. Built on 'igraph' with new C++ calculations exposed via 'Rcpp'.

queueing — by Pedro Canadilla, 7 years ago

Analysis of Queueing Networks and Models

It provides versatile tools for analysis of birth and death based Markovian Queueing Models and Single and Multiclass Product-Form Queueing Networks. It implements M/M/1, M/M/c, M/M/Infinite, M/M/1/K, M/M/c/K, M/M/c/c, M/M/1/K/K, M/M/c/K/K, M/M/c/K/m, M/M/Infinite/K/K, Multiple Channel Open Jackson Networks, Multiple Channel Closed Jackson Networks, Single Channel Multiple Class Open Networks, Single Channel Multiple Class Closed Networks and Single Channel Multiple Class Mixed Networks. Also it provides a B-Erlang, C-Erlang and Engset calculators. This work is dedicated to the memory of D. Sixto Rios Insua.

NeuralSens — by Jaime Pizarroso Gonzalo, 2 years ago

Sensitivity Analysis of Neural Networks

Analysis functions to quantify inputs importance in neural network models. Functions are available for calculating and plotting the inputs importance and obtaining the activation function of each neuron layer and its derivatives. The importance of a given input is defined as the distribution of the derivatives of the output with respect to that input in each training data point .

bnpa — by Elias Carvalho, 7 years ago

Bayesian Networks & Path Analysis

This project aims to enable the method of Path Analysis to infer causalities from data. For this we propose a hybrid approach, which uses Bayesian network structure learning algorithms from data to create the input file for creation of a PA model. The process is performed in a semi-automatic way by our intermediate algorithm, allowing novice researchers to create and evaluate their own PA models from a data set. The references used for this project are: Koller, D., & Friedman, N. (2009). Probabilistic graphical models: principles and techniques. MIT press. . Nagarajan, R., Scutari, M., & Lèbre, S. (2013). Bayesian networks in r. Springer, 122, 125-127. Scutari, M., & Denis, J. B. . Scutari M (2010). Bayesian networks: with examples in R. Chapman and Hall/CRC. . Rosseel, Y. (2012). lavaan: An R Package for Structural Equation Modeling. Journal of Statistical Software, 48(2), 1 - 36. .

voson.tcn — by Bryan Gertzel, 4 years ago

Twitter Conversation Networks and Analysis

Collects tweets and metadata for threaded conversations and generates networks.

NetSwan — by Serge Lhomme, 11 years ago

Network Strengths and Weaknesses Analysis

A set of functions for studying network robustness, resilience and vulnerability.

ManyIVsNets — by Avishek Bhandari, a year ago

Environmental Phillips Curve Analysis with Multiple Instrumental Variables and Networks

Comprehensive toolkit for Environmental Phillips Curve analysis featuring multidimensional instrumental variable creation, transfer entropy causal discovery, network analysis, and state-of-the-art econometric methods. Implements geographic, technological, migration, geopolitical, financial, and natural risk instruments with robust diagnostics and visualization. Provides 24 different instrumental variable approaches with empirical validation. Methods based on Phillips (1958) , transfer entropy by Schreiber (2000) , and weak instrument tests by Stock and Yogo (2005) .

network — by Carter T. Butts, 7 months ago

Classes for Relational Data

Tools to create and modify network objects. The network class can represent a range of relational data types, and supports arbitrary vertex/edge/graph attributes.

metapack — by Daeyoung Lim, 3 years ago

Bayesian Meta-Analysis and Network Meta-Analysis

Contains functions performing Bayesian inference for meta-analytic and network meta-analytic models through Markov chain Monte Carlo algorithm. Currently, the package implements Hui Yao, Sungduk Kim, Ming-Hui Chen, Joseph G. Ibrahim, Arvind K. Shah, and Jianxin Lin (2015) and Hao Li, Daeyoung Lim, Ming-Hui Chen, Joseph G. Ibrahim, Sungduk Kim, Arvind K. Shah, Jianxin Lin (2021) . For maximal computational efficiency, the Markov chain Monte Carlo samplers for each model, written in C++, are fine-tuned. This software has been developed under the auspices of the National Institutes of Health and Merck & Co., Inc., Kenilworth, NJ, USA.

motifr — by Mario Angst, 6 years ago

Motif Analysis in Multi-Level Networks

Tools for motif analysis in multi-level networks. Multi-level networks combine multiple networks in one, e.g. social-ecological networks. Motifs are small configurations of nodes and edges (subgraphs) occurring in networks. 'motifr' can visualize multi-level networks, count multi-level network motifs and compare motif occurrences to baseline models. It also identifies contributions of existing or potential edges to motifs to find critical or missing edges. The package is in many parts an R wrapper for the excellent 'SESMotifAnalyser' 'Python' package written by Tim Seppelt.