Time-Course Gene Set Analysis

Implementation of Time-course Gene Set Analysis(TcGSA), a method for analyzing longitudinal gene-expression data at the gene set level.


News about the R package TcGSA:

Main changes in Version 0.10.5 (2017-05-03):

  • Bug fix: plot.TcGSA better handles more various geneses names

Reference manual

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0.10.5 by Boris P. Hejblum, 10 months ago

Report a bug at https://github.com/borishejblum/TcGSA/issues

Browse source code at https://github.com/cran/TcGSA

Authors: Boris P. Hejblum [aut, cre], Damien Chimits [aut]

Documentation:   PDF Manual  

GPL-2 | file LICENSE license

Imports lme4, reshape2, GSA, multtest, gtools, cluster, stringr, splines, gplots, stats, graphics, grDevices, utils

Depends on ggplot2

Suggests foreach, parallel, doParallel, tcgsaseq

See at CRAN