Time-Course Gene Set Analysis

Implementation of Time-course Gene Set Analysis (TcGSA), a method for analyzing longitudinal gene-expression data at the gene set level.


News

News about the R package TcGSA:

Main changes in Version 0.10.5 (2017-05-03):

  • Bug fix: plot.TcGSA better handles more various geneses names

Reference manual

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install.packages("TcGSA")

0.11.1 by Boris P. Hejblum, 16 days ago


Report a bug at https://github.com/borishejblum/TcGSA/issues


Browse source code at https://github.com/cran/TcGSA


Authors: Boris P. Hejblum [aut, cre], Damien Chimits [aut], Anthony Devaux [aut]


Documentation:   PDF Manual  


GPL-2 | file LICENSE license


Imports lme4, reshape2, GSA, multtest, cluster, cowplot, gplots, graphics, grDevices, gtools, stringr, splines, stats, utils

Depends on ggplot2

Suggests foreach, parallel, doParallel, tcgsaseq, knitr, GEOquery, rmarkdown


See at CRAN