Number and Brightness Image Analysis

Functions for calculation of molecular number and brightness from images, as detailed in Digman et al. 2008 . Includes the implementation of the novel "automatic detrending" technique.


Reference manual

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0.2.1 by Rory Nolan, 7 months ago

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Authors: Rory Nolan [aut, cre, cph], Luis Alvarez [ctb], Sergi Padilla-Parra [ctb, ths, cph]

Documentation:   PDF Manual  

BSD_3_clause + file LICENSE license

Imports Rcpp, filesstrings, magrittr, readr, reshape2, R.utils, autothresholdr, abind, viridis, dplyr, matrixStats, BiocParallel, stringr, EBImage, RSAGA, ggplot2, grDevices, RcppRoll, tibble, purrr, hexbin, ore, DescTools

Suggests knitr, rmarkdown, covr, testthat

Linking to Rcpp, BH

See at CRAN