Non-Parametric Measures of Actigraphy Data

Computes interdaily stability (IS), intradaily variability (IV) & the relative amplitude (RA) from actigraphy data as described in Blume et al. (2016) and van Someren et al. (1999) . Additionally, it also computes L5 (i.e. the 5 hours with lowest average actigraphy amplitude) and M10 (the 10 hours with highest average amplitude) as well as the respective start times. The flex versions will also compute the L-value for a user-defined number of minutes. IS describes the strength of coupling of a rhythm to supposedly stable zeitgebers. It varies between 0 (Gaussian Noise) and 1 for perfect IS. IV describes the fragmentation of a rhythm, i.e. the frequency and extent of transitions between rest and activity. It is near 0 for a perfect sine wave, about 2 for Gaussian noise and may be even higher when a definite ultradian period of about 2 hrs is present. RA is the relative amplitude of a rhythm. Note that to obtain reliable results, actigraphy data should cover a reasonable number of days.


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install.packages("nparACT")

0.7 by Christine Blume, a year ago


https://www.r-project.org


Browse source code at https://github.com/cran/nparACT


Authors: Christine Blume <christine.blume@sbg.ac.at> Nayantara Santhi <n.santhi@surrey.ac.uk> Manuel Schabus <manuel.schabus@sbg.ac.at>


Documentation:   PDF Manual  


GPL-2 license


Imports ggplot2, grid, stringr, zoo


See at CRAN