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1.0.12 by Evan Biederstedt, 2 months ago

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https://github.com/kharchenkolab/pagoda2

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Report a bug at https://github.com/kharchenkolab/pagoda2/issues

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Browse source code at https://github.com/cran/pagoda2

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Authors: Nikolas Barkas [aut] , Viktor Petukhov [aut] , Peter Kharchenko [aut] , Simon Steiger [ctb] , Rasmus Rydbirk [ctb] , Evan Biederstedt [cre, aut]

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Documentation:   PDF Manual  

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GPL-3 license

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Imports dendsort, drat, fastcluster, graphics, grDevices, irlba, magrittr, MASS, mgcv, methods, N2R, parallel, plyr, R.utils, Rcpp, rjson, rlang, R6, RMTstat, Rook, Rtsne, sccore, stats, urltools, utils

Depends on Matrix, igraph

Suggests AnnotationDbi, base64enc, BiocGenerics, BiocParallel, colorRamps, data.table, dbscan, dplyr, ggplot2, GO.db, gridExtra, KernSmooth, knitr, org.Dr.eg.db, org.Hs.eg.db, org.Mm.eg.db, pcaMethods, pheatmap, rgl, rmarkdown, robustbase, scde, testthat, uwot

Linking to Rcpp, RcppArmadillo, RcppProgress, RcppEigen

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Suggested by CRMetrics, conos, scITD.

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See at CRAN