Reference manual

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install.packages("igraph")

2.0.3 by Kirill Müller, 2 months ago


https://r.igraph.org/, https://igraph.org/, https://igraph.discourse.group/


Report a bug at https://github.com/igraph/rigraph/issues


Browse source code at https://github.com/cran/igraph


Authors: Gábor Csárdi [aut] , Tamás Nepusz [aut] , Vincent Traag [aut] , Szabolcs Horvát [aut] , Fabio Zanini [aut] , Daniel Noom [aut] , Kirill Müller [aut, cre] , Maëlle Salmon [ctb] , Michael Antonov [ctb] , Chan Zuckerberg Initiative [fnd]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports cli, graphics, grDevices, lifecycle, magrittr, Matrix, pkgconfig, rlang, stats, utils, vctrs

Depends on methods

Suggests ape, callr, decor, digest, graph, igraphdata, knitr, rgl, rmarkdown, scales, stats4, tcltk, testthat, vdiffr, withr

Linking to cpp11

System requirements: libxml2 (optional), glpk (>= 4.57, optional)


Imported by AFM, AHPWR, AnimalHabitatNetwork, BASiNET, BASiNETEntropy, BCT, BDgraph, BGmisc, BallMapper, BayesNetBP, BayesSUR, BeeBDC, BioM2, Bioi, BlockmodelingGUI, BoolNet, BoundaryStats, C443, CARBayes, CARlasso, CINNA, CKMRpop, Canek, Cascade, CePa, CeRNASeek, CliquePercolation, ClusTorus, ClustAssess, CoDiNA, CoNI, ConnectednessApproach, ConsensusClustering, CooRTweet, Corbi, DCLEAR, DDPNA, DIscBIO, DNLC, DRviaSPCN, DTSEA, DemoKin, DiagrammeR, DirectedClustering, DrDimont, DrugSim2DR, ECoL, EDOIF, EGAnet, ERPM, EcoNetGen, EcotoneFinder, EmbedSOM, EpiILMCT, EstimateGroupNetwork, FAIRmaterials, FCMapper, FactorCopula, FedData, FindIt, ForestGapR, FrF2, GALLO, GISSB, GMPro, GNAR, GOCompare, GOxploreR, GREMLINS, GeNetIt, GoodFitSBM, HTSSIP, HTT, HeteroGGM, Holomics, HospitalNetwork, ICDS, IDMIR, ILSM, IMEC, ITNr, Jdmbs, KMD, Karen, L1centrality, LSVAR, LTFHPlus, LoopDetectR, MBNMAdose, MMOC, MRFcov, MRReg, MRS, MSCquartets, MTA, MadanTextNetwork, Mercator, MetricGraph, MultIS, NAIR, NIMAA, Neighboot, NetCoupler, NetFACS, NetMix, NetOrigin, NetworkChange, NetworkComparr, NetworkDistance, NetworkExtinction, NetworkToolbox, OCNet, ORION, OUwie, OpenRepGrid, OpenRepGrid.ic, OrdCD, PAC, PAFit, PANACEA, PCGII, PGRdup, PLEXI, PLNmodels, PNAR, POSetR, PUGMM, PWIR, PaRe, PanelMatch, Patterns, PhaseTypeR, PlackettLuce, PolyTree, ProgModule, ProjectManagement, R.temis, R6causal, RDS, RNAseqNet, RPANDA, RSP, RWgraph, RaceID, Racmacs, Radviz, RavenR, RcextTools, RcmdrPlugin.RMTCJags, ReliabilityTheory, RepertoiR, ResIN, RevEcoR, Rnmr1D, RobustIV, SBN, SCORPION, SEMID, SID, SIRE, SOAs, STraTUS, ScorePlus, SelectBoost, SemNeT, SeqDetect, SeqNet, Seurat, SignacX, SmCCNet, SoilR, SpaDES.core, SpatialGraph, SubtypeDrug, SurvHiDim, SystemicR, TAShiny, TDA, TOHM, TOmicsVis, TPEA, TangledFeatures, Tlasso, TreeDimensionTest, UNCOVER, VARDetect, VOSONDash, VertexSimilarity, WayFindR, WebGestaltR, aPEAR, adegenet, adproclus, akc, alakazam, aniSNA, anipaths, apisensr, archeofrag, arulesViz, autoharp, backShift, backbone, bamm, bartMan, basket, baycn, bcgam, bibliometrix, bigergm, bioregion, bipartite, bnma, bnviewer, bootcluster, bootnet, btergm, bwsTools, cancerGI, cape, cartograflow, cassowaryr, causact, causalDisco, causaleffect, ccTensor, chatAI4R, chemodiv, cholera, clustNet, clustree, clustringr, comato, communication, concatipede, concorR, corHMM, corTest, corpustools, corrViz, crandep, cranly, criticalpath, crosstalkr, csurvey, cytometree, deaR, degreenet, delayed, dendroNetwork, dexterMST, diffeRenTES, diffudist, diffusionMap, discourseGT, distinctiveness, dm, dnr, dogesr, doolkit, drake, dsem, dupNodes, dynetNLAResistance, dyngen, dynwrap, eHDPrep, easybgm, ecoCopula, ecodist, econet, econetwork, economiccomplexity, edgebundle, edgebundleR, edmcr, eff2, einet, enviGCMS, epicontacts, epinetr, erah, espadon, ess, etree, evolqg, fairadapt, fake, fakemake, fastRG, fastnet, fbnet, finnsurveytext, fnets, foodingraph, forestRK, fossilbrush, fssemR, gRain, gRbase, gRc, gRim, gamCopula, gemtc, genBaRcode, geohabnet, geonetwork, ggdag, ggenealogy, ggflowchart, ggm, ggnetwork, ggraph, gimme, goat, grainscape, grand, graph4lg, graphTweets, graphclust, graphicalExtremes, graphicalVAR, graphlayouts, graphsim, gromovlab, gtexture, handwriter, heteromixgm, highcharter, hisse, huge, iCARH, iCellR, iGraphMatch, icosa, idopNetwork, igraphinshiny, imager, immunarch, immuneSIM, imsig, incidentally, influenceR, influential, intensitynet, intergraph, interplex, jewel, jrSiCKLSNMF, jti, kangar00, keyplayer, kknn, kstMatrix, l1spectral, latenetwork, lconnect, leastcostpath, leiden, leidenAlg, leidenbase, lexRankr, linkprediction, macrosyntR, madrat, malan, manymome, manynet, margaret, markovchain, matrixcut, mau, maxmatching, mazeGen, mcMST, mcvis, meconetcomp, metacoder, metanetwork, mfpp, microeco, migraph, miniCRAN, missSBM, mitre, mlmts, mmibain, mnda, modelbpp, modnets, motifcluster, motifr, movementsync, mppR, mstknnclust, mully, multilaterals, multilink, multinets, multinma, multivariance, mverse, mwTensor, mwcsr, nat, nat.templatebrains, nda, neat, neatmaps, neo4r, netCoin, netShiny, netUtils, netdiffuseR, netgsa, netgwas, netmap, netplot, netrankr, netropy, nets, netseer, netseg, networkD3, networkGen, networktools, nevada, nimble, nlnet, nlrx, nncc, node2vec, noisysbmGGM, numbat, nutriNetwork, oddnet, ohun, pGRN, pald, particles, pathfindR, pcFactorStan, pcalg, pencopulaCond, perturbR, phangorn, phyloTop, phylopath, phyloregion, phyloseqGraphTest, phylosignal, piecewiseSEM, pkggraph, pkgnet, plantTracker, plinkQC, pmd, polymapR, pomdp, pop, poppr, prioritizr, provGraphR, psSubpathway, ptm, ptools, qdap, qgraph, quanteda.textplots, rD3plot, rEMM, rPref, rSpectral, rTwig, rags2ridges, rcrimeanalysis, rdracor, refdb, regnet, remify, rflexscan, rgexf, rhcoclust, riverconn, rmcfs, rnmamod, roads, robber, robustrao, roots, roughnet, rscc, rsetse, rsppfp, rsyntax, sBIC, saotd, sbm, scDHA, scINSIGHT, scRNAtools, scalpel, scapGNN, sccore, scistreer, secrlinear, semPlot, seqHMM, sfcr, sfnetworks, sharp, shazam, shock, sidier, sigmajs, signnet, simcausal, simer, simplifyNet, skynet, smallstuff, smotefamily, snahelper, snowboot, solitude, spNetwork, spacejamr, spathial, spatsoc, specr, spinner, spreadr, ssMutPA, ssifs, statGraph, stemmatology, targets, text2map, textrank, tidySEM, tidygraph, tilemaps, tip, topologyGSA, tosr, treefit, treemap, vivainsights, vivid, wdnet, webSDM, whitechapelR, whomds, wpa, xLLiM.

Depended on by AurieLSHGaussian, BNSL, Boptbd, CTD, Diderot, DiffCorr, DiffNet, GADAG, GSD, HOasso, HyperG, JGL, LPKsample, LncPath, MEGENA, MNS, MetaLandSim, MetaNet, NEpiC, NetSwan, RCA, RGraphSpace, RNetLogo, RNewsflow, SARP.compo, SEMgraph, SOMbrero, SVN, ShapePattern, SubpathwayLNCE, bbnet, bc3net, bnstruct, brainGraph, c3net, causaloptim, cccd, centiserve, cglasso, clickstream, clustAnalytics, conos, corclass, coreCT, corkscrew, dc3net, diffee, disparityfilter, ebdbNet, editrules, fanovaGraph, fasjem, flare, func2vis, gdistance, genlasso, gor, graphkernels, habCluster, hglasso, iDINGO, igraphtosonia, immcp, jeek, linkcomm, locits, mRMRe, manet, massiveGST, micropan, modMax, morph, multichull, multinet, netassoc, optbdmaeAT, optrcdmaeAT, pagoda2, parsec, pcSteiner, postHoc, qtlnet, regmed, robin, sand, satdad, sglasso, shp2graph, simule, sindyr, soptdmaeA, streamDAG, threejs, timeordered, tnet, wfg.

Suggested by BiCausality, BiodiversityR, BoomSpikeSlab, CASCORE, CBnetworkMA, CNVScope, ConnMatTools, CovCombR, DDD, DRquality, DramaAnalysis, FCPS, FinNet, GGally, HelpersMG, IOHanalyzer, LSTbook, Libra, MBNMAtime, MR.RGM, MSG, NAC, NetworkInference, NetworkRiskMeasures, PairViz, RScelestial, RTMB, ReDaMoR, ReporterScore, Rwclust, Ryacas, Ryacas0, SITH, TDApplied, TNC, TextMiningGUI, TunePareto, agop, anocva, ape, atrrr, bifurcatingr, bio3d, blackbox, bnclassify, bnlearn, breathteststan, bsub, cfid, chessboard, chouca, cito, coglasso, countland, cppRouting, cspp, d3po, dagitty, dartR, dartR.base, dartR.captive, dartR.popgen, datapack, dbscan, debkeepr, deepdep, dimRed, diverse, dodgr, dosearch, dst, dyndimred, econullnetr, ecpc, egor, eicm, epigraphdb, epiworldR, factoextra, finbipartite, frechet, fsbrain, functiondepends, funspotr, gamlss.ggplots, genscore, ggokabeito, ghypernet, goldfish, graphon, greed, gsbm, hero, hydra, igraphdata, industRial, inferCSN, invertiforms, isa2, isotracer, knitrBootstrap, latrend, lava, lfe, lolog, maotai, metadat, miic, mlr3pipelines, mlr3shiny, nbTransmission, net4pg, netcmc, netmediate, netmeta, nett, nexus, nosoi, oaqc, outbreaker2, paramlink, pcutils, pedmod, pedtools, pkgndep, polmineR, polyqtlR, primer, protti, purgeR, rIsing, rangeMapper, raster, rbmn, readsdr, recipes, repo, rgraph6, rnetcarto, rquery, rtweet, rvinecopulib, scDiffCom, secr, secuTrialR, sensitivity, seqtrie, sfdep, sharpshootR, simDAG, sirt, spatialreg, spdep, spdynmod, spectralGraphTopology, stabm, stagedtrees, stm, stplanr, surface, surveygraph, textmineR, textplot, tgver, tidyjson, treespace, visNetwork, vkR, vocaldia, vosonSML, vsp, widyr, wikkitidy, wildlifeDI, xgboost, xtranat, zoomerjoin.

Enhanced by d3r, data.tree, rviewgraph.


See at CRAN