Statistical Exploration of Landscapes of Phylogenetic Trees

Tools for the exploration of distributions of phylogenetic trees. This package includes a shiny interface which can be started from R using 'treespaceServer()'.


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install.packages("treespace")

1.0.0 by Thibaut Jombart, 6 months ago


Browse source code at https://github.com/cran/treespace


Authors: Thibaut Jombart [aut, cre], Michelle Kendall [aut], Jacob Almagro-Garcia [aut], Caroline Colijn [aut]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports adegenet, adegraphics, adephylo, combinat, compiler, distory, fields, htmlwidgets, MASS, phangorn, Rcpp, RLumShiny, scatterD3, shiny, shinyBS, utils

Depends on ape, ade4

Suggests igraph, RColorBrewer, ggplot2, testthat, knitr, rmarkdown, rgl

Linking to Rcpp


See at CRAN