Found 128 packages in 0.01 seconds
Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry Data
Dirichlet process mixture of multivariate normal, skew normal or skew t-distributions modeling oriented towards flow-cytometry data preprocessing applications.
Deprecated 'classic' 'Rcpp' 'API'
The 'RcppClassic' package provides a deprecated C++ library which facilitates the integration of R and C++. New projects should use the new 'Rcpp' 'API' in the 'Rcpp' package.
Quick Serialization of R Objects
Provides functions for quickly writing and reading any R object to and from disk. This package makes use of the 'zstd' library for compression and decompression. 'zstd' is created by Yann Collet and owned by Facebook, Inc.
Exploring the Phylogenetic Signal in Continuous Traits
A collection of tools to explore the phylogenetic signal in univariate and multivariate data. The package provides functions to plot traits data against a phylogenetic tree, different measures and tests for the phylogenetic signal, methods to describe where the signal is located and a phylogenetic clustering method.
R-Based Wikipedia Client
Provides an interface to the Wikipedia web application programming interface (API), using internet connexion.Three functions provide details for a specific Wikipedia page : all links that are present, all pages that link to, all the contributions (revisions for main pages, and discussions for talk pages). Two functions provide details for a specific user : all contributions, and general information (as name, gender, rights or groups). It provides additional information compared to others packages, as WikipediR. It does not need login. The multiplex network that can be constructed from the results of the functions of WikipediaR can be modeled as Stochastic Block Model as in Barbillon P., Donnet, S., Lazega E., and Bar-Hen A. : Stochastic Block Models for Multiplex networks: an application to networks of researchers, ArXiv 1501.06444, http://arxiv.org/abs/1501.06444.
Ecological Drift under the UNTB
A collection of utilities for biodiversity data. Includes the simulation of ecological drift under Hubbell's Unified Neutral Theory of Biodiversity, and the calculation of various diagnostics such as Preston curves. Now includes functionality provided by Francois Munoz and Andrea Manica.
'Rcpp' Integration for the 'Blaze' High-Performance C++ Math Library
'Blaze' is an open-source, high-performance C++ math library for dense and sparse arithmetic. With its state-of-the-art Smart Expression Template implementation 'Blaze' combines the elegance and ease of use of a domain-specific language with 'HPC'-grade performance, making it one of the most intuitive and fastest C++ math libraries available. The 'Blaze' library offers: - high performance through the integration of 'BLAS' libraries and manually tuned 'HPC' math kernels - vectorization by 'SSE', 'SSE2', 'SSE3', 'SSSE3', 'SSE4', 'AVX', 'AVX2', 'AVX-512', 'FMA', and 'SVML' - parallel execution by 'OpenMP', C++11 threads and 'Boost' threads ('Boost' threads are disabled in 'RcppBlaze') - the intuitive and easy to use API of a domain specific language - unified arithmetic with dense and sparse vectors and matrices - thoroughly tested matrix and vector arithmetic - completely portable, high quality C++ source code. The 'RcppBlaze' package includes the header files from the 'Blaze' library with disabling some functionalities related to link to the thread and system libraries which make 'RcppBlaze' be a header-only library. Therefore, users do not need to install 'Blaze' and the dependency 'Boost'. 'Blaze' is licensed under the New (Revised) BSD license, while 'RcppBlaze' (the 'Rcpp' bindings/bridge to 'Blaze') is licensed under the GNU GPL version 2 or later, as is the rest of 'Rcpp'. Note that since 'Blaze' has committed to 'C++14' commit to 'C++14' which does not used by most R users from version 3.0, we will use the version 2.6 of 'Blaze' which is 'C++98' compatible to support the most compilers and system.
Geophysics, Continuum Mechanics, Gravity Modeling
Codes for analyzing various problems of geophysics, continuum mechanics and gravity models.
Read Hierarchical Fixed Width Files
Read hierarchical fixed width files like those commonly used by many census data providers. Also allows for reading of data in chunks, and reading 'gzipped' files without storing the full file in memory.