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Inference Using Simulation
Implements functions for simulation-based inference. In particular, implements functions to perform likelihood inference from data summaries whose distributions are simulated (Rousset et al. 2017
Population Genetic Data Analysis Using Genepop
Makes the Genepop software available in R. This software implements a mixture of traditional population genetic methods and some more focused developments: it computes exact tests for Hardy-Weinberg equilibrium, for population differentiation and for genotypic disequilibrium among pairs of loci; it computes estimates of F-statistics, null allele frequencies, allele size-based statistics for microsatellites, etc.; and it performs analyses of isolation by distance from pairwise comparisons of individuals or population samples.
Rcpp bindings for the Boost Date_Time library
This package provides R with access to Boost Date_Time functionality by using Rcpp modules. Functionality from Boost Date_Time for dates, durations (both for days and datetimes), timezones, and posix time ("ptime") is provided. The posix time implementation can support high-resolution of up to nano-second precision by using 96 bits (instead of R's 64) to present a ptime object.
GPL Palettes Copied from 'Gimp' and 'Inkscape'
Distributions that are Sometimes Used in Hydrology
Probability distributions that are sometimes useful in hydrology.
C++ Classes to Embed R in C++ Applications
C++ classes to embed R in C++ applications The 'RInside' packages makes it easier to have "R inside" your C++ application by providing a C++ wrapper class providing the R interpreter. As R itself is embedded into your application, a shared library build of R is required. This works on Linux, OS X and even on Windows provided you use the same tools used to build R itself. Numerous examples are provided in the eight subdirectories of the examples/ directory of the installed package: standard, mpi (for parallel computing) qt (showing how to embed 'RInside' inside a Qt GUI application), wt (showing how to build a "web-application" using the Wt toolkit), armadillo (for 'RInside' use with 'RcppArmadillo') and eigen (for 'RInside' use with 'RcppEigen'). The example use GNUmakefile(s) with GNU extensions, so a GNU make is required (and will use the GNUmakefile automatically). Doxygen-generated documentation of the C++ classes is available at the 'RInside' website as well.
Examples using 'Rcpp' to Interface R and C++
Examples for Seamless R and C++ integration The 'Rcpp' package contains a C++ library that facilitates the integration of R and C++ in various ways. This package provides some usage examples. Note that the documentation in this package currently does not cover all the features in the package. It is not even close. On the other hand, the site < http://gallery.rcpp.org> is regrouping a large number of examples for 'Rcpp'.
Coalescent-Based Simulation of Ecological Communities
Coalescent-Based Simulation of Ecological Communities as proposed
by Munoz et al. (2017)
Travel To Work Area.
This package makes Travel To Work Area from a commuting flow data frame.
A Lightweight Template for Data Analysis Projects
Creates useful files and folders for data analysis projects and provides functions to manage data, scripts and output files. Also provides a project template for 'Rstudio'.