Examples: visualization, C++, networks, data cleaning, html widgets, ropensci.

Found 129 packages in 0.02 seconds

depth — by Jean-Francois Plante, 2 years ago

Nonparametric Depth Functions for Multivariate Analysis

Tools for depth functions methodology applied to multivariate analysis. Besides allowing calculation of depth values and depth-based location estimators, the package includes functions or drawing contour plots and perspective plots of depth functions. Euclidian and spherical depths are supported.

cytoDiv — by Francois Ribalet, 7 years ago

Cytometric diversity indices

Calculates ecological diversity indices for a microbial community

rvg — by David Gohel, 9 months ago

R Graphics Devices for Vector Graphics Output

Vector Graphics devices for 'SVG', 'DrawingML' for Microsoft PowerPoint and Excel. Functions extending package 'officer' are provided to embed 'DrawingML' graphics into 'Microsoft PowerPoint' presentations and 'Microsoft Excel' workbooks.

rotl — by Francois Michonneau, a month ago

Interface to the 'Open Tree of Life' API

An interface to the 'Open Tree of Life' API to retrieve phylogenetic trees, information about studies used to assemble the synthetic tree, and utilities to match taxonomic names to 'Open Tree identifiers'. The 'Open Tree of Life' aims at assembling a comprehensive phylogenetic tree for all named species.

SMITIDvisu — by Jean-Francois Rey, 19 days ago

Visualize Data for Host and Viral Population from 'SMITIDstruct' using HTMLwidgets

Visualisation tools for 'SMITIDstruct' package. Allow to visualize host timeline, transmission tree, index diversities and variant graph using HTMLwidgets. It mainly using D3JS javascript framework.

keras — by JJ Allaire, 4 months ago

R Interface to 'Keras'

Interface to 'Keras' < https://keras.io>, a high-level neural networks 'API'. 'Keras' was developed with a focus on enabling fast experimentation, supports both convolution based networks and recurrent networks (as well as combinations of the two), and runs seamlessly on both 'CPU' and 'GPU' devices.

ZeBook — by Francois Brun, 4 months ago

Working with Dynamic Models for Agriculture and Environment

R package accompanying the book Working with dynamic models for agriculture and environment, by Daniel Wallach (INRA), David Makowski (INRA), James W. Jones (U.of Florida), Francois Brun (ACTA). 3rd edition 2018-09-27.

bigFastlm — by Jared Huling, 2 years ago

Fast Linear Models for Objects from the 'bigmemory' Package

A reimplementation of the fastLm() functionality of 'RcppEigen' for big.matrix objects for fast out-of-memory linear model fitting.

fastglm — by Jared Huling, 16 days ago

Fast and Stable Fitting of Generalized Linear Models using 'RcppEigen'

Fits generalized linear models efficiently using 'RcppEigen'. The iteratively reweighted least squares implementation utilizes the step-halving approach of Marschner (2011) to help safeguard against convergence issues.

abc — by Blum Michael, 4 years ago

Tools for Approximate Bayesian Computation (ABC)

Implements several ABC algorithms for performing parameter estimation, model selection, and goodness-of-fit. Cross-validation tools are also available for measuring the accuracy of ABC estimates, and to calculate the misclassification probabilities of different models.